I am not exactly sure what you are referring to here but it sounds like he is talking about encoder quantization noise.
For a basic PID loop and simple encoder counter there are limitations with the calculation of velocity for the PID loop at low motor speeds (so the encoder count rate is small relative to the loop sample rate)
Imagine that you have a 2 KHz sample rate and a 500 line (2000 count) encoder. if the motor speed is exactly 1 RPS you would get 1 encoder count difference per sample but if you moved a little slower you would get a sequence of encoder count
differences like 1,1,1,1,0,1,1,1,1,0,1,1,1,1,1,0 etc if you moved a little faster than 1 RPS you would get differences like 1,1,1,2,1,1,1,2 etc. Since the D term of the PID loop is calculated from these count differences you will get a very noisy D term feedback signal. Notice that the noise magnitude in RPS is SAMPLERATE/ENCODER_COUNTS
So lower sample rates will reduce this noise (but also reduce the loop bandwidth making it harder to keep stable).
You can also low pass filter the velocity signal before sending it to the PID loop. This also reduces loop bandwith so is not the best solution
EMCs software and Mesa and Pico systems hardware encoder counters have a scheme to reduce this quantization noise so are much better than simple encoder counters at providing low noise velocity signals. They do this by time-stamping every encoder count edge.
The velocity is not calculated by delta_counts/sample period method used above but rather by delta_counts/delta_time where delta_time is measured between encoder quadrature edges. This results in a large (5-10 times for a good encoder) reduction in quantization noise.
To use this feature you must feed the velocity output of the encoder counter module to the PID loops feedback-deriv pin
this will make the PID component use this better velocity estimation instead of using simple position count differences with the quantization noise problems. (this improved PID component is in EMC 2.5)
All this to say EMCs software encoder, Mesa and Pico systems hardware encoders have a low sensitivity to high loop rates increasing control loop noise (when configured correctly)